Cluster: Rep_3459_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3459
- CGC Family ID: CGCFAM_01662
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3459_c_42 | Rep_3459_c_42_9 | 10120 | 12120 | + | GH5_4 |
| CAZyme | Rep_3459_c_42 | Rep_3459_c_42_10 | 12198 | 13037 | - | GT2 |
| TC | Rep_3459_c_42 | Rep_3459_c_42_11 | 13162 | 14790 | - | 3.A.1.5.41 |
Gene ID: Rep_3459_c_42_9
Type: CAZyme
Location: 10120 - 12120 (+)
Type: CAZyme
Location: 10120 - 12120 (+)
Gene ID: Rep_3459_c_42_10
Type: CAZyme
Location: 12198 - 13037 (-)
Type: CAZyme
Location: 12198 - 13037 (-)
Gene ID: Rep_3459_c_42_11
Type: TC
Location: 13162 - 14790 (-)
Type: TC
Location: 13162 - 14790 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp017935365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.