Cluster: Rep_3459_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3459
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3459_c_11 | Rep_3459_c_11_7 | 7009 | 8679 | - | CBM2 | GH5_2 |
| NULL(UNKNOWN) | Rep_3459_c_11 | Rep_3459_c_11_8 | 8703 | 9551 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3459_c_11 | Rep_3459_c_11_9 | 9840 | 10403 | + | 3.A.1.25.2 |
| TC | Rep_3459_c_11 | Rep_3459_c_11_10 | 11042 | 12400 | + | 2.A.66.1.37 |
Gene ID: Rep_3459_c_11_7
Type: CAZyme
Location: 7009 - 8679 (-)
Type: CAZyme
Location: 7009 - 8679 (-)
Gene ID: Rep_3459_c_11_8
Type:
Location: 8703 - 9551 (-)
Type:
Location: 8703 - 9551 (-)
Gene ID: Rep_3459_c_11_9
Type: TC
Location: 9840 - 10403 (+)
Type: TC
Location: 9840 - 10403 (+)
Gene ID: Rep_3459_c_11_10
Type: TC
Location: 11042 - 12400 (+)
Type: TC
Location: 11042 - 12400 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp017935365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.