Cluster: Rep_3459_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3459
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3459_c_136 | Rep_3459_c_136_12 | 10544 | 11875 | - | 1.B.52.2.2 |
| pfam | Rep_3459_c_136 | Rep_3459_c_136_13 | 12050 | 12550 | - | QueT |
| NULL(UNKNOWN) | Rep_3459_c_136 | Rep_3459_c_136_14 | 12842 | 13003 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3459_c_136 | Rep_3459_c_136_15 | 13136 | 14521 | + | 2.A.66.1.28 |
| CAZyme | Rep_3459_c_136 | Rep_3459_c_136_16 | 14695 | 17469 | + | GH3 |
Gene ID: Rep_3459_c_136_12
Type: TC
Location: 10544 - 11875 (-)
Type: TC
Location: 10544 - 11875 (-)
Gene ID: Rep_3459_c_136_13
Type: pfam
Location: 12050 - 12550 (-)
Type: pfam
Location: 12050 - 12550 (-)
Gene ID: Rep_3459_c_136_14
Type:
Location: 12842 - 13003 (-)
Type:
Location: 12842 - 13003 (-)
Gene ID: Rep_3459_c_136_15
Type: TC
Location: 13136 - 14521 (+)
Type: TC
Location: 13136 - 14521 (+)
Gene ID: Rep_3459_c_136_16
Type: CAZyme
Location: 14695 - 17469 (+)
Type: CAZyme
Location: 14695 - 17469 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp017935365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.