Cluster: Rep_3459_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3459
- CGC Family ID: CGCFAM_01058
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3459_c_3 | Rep_3459_c_3_1 | 102 | 1715 | - | 3.A.1.121.4 |
| pfam | Rep_3459_c_3 | Rep_3459_c_3_2 | 2153 | 2941 | + | ADP_ribosyl_GH |
| pfam | Rep_3459_c_3 | Rep_3459_c_3_3 | 3005 | 4048 | + | His_Phos_1 |
| CAZyme | Rep_3459_c_3 | Rep_3459_c_3_4 | 4293 | 6149 | + | GH3 |
Gene ID: Rep_3459_c_3_1
Type: TC
Location: 102 - 1715 (-)
Type: TC
Location: 102 - 1715 (-)
Gene ID: Rep_3459_c_3_2
Type: pfam
Location: 2153 - 2941 (+)
Type: pfam
Location: 2153 - 2941 (+)
Gene ID: Rep_3459_c_3_3
Type: pfam
Location: 3005 - 4048 (+)
Type: pfam
Location: 3005 - 4048 (+)
Gene ID: Rep_3459_c_3_4
Type: CAZyme
Location: 4293 - 6149 (+)
Type: CAZyme
Location: 4293 - 6149 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp017935365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.