Cluster: Rep_3459_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3459
- CGC Family ID: CGCFAM_01880
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3459_c_113 | Rep_3459_c_113_1 | 125 | 748 | - | CE4 |
| NULL(UNKNOWN) | Rep_3459_c_113 | Rep_3459_c_113_2 | 763 | 1395 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3459_c_113 | Rep_3459_c_113_3 | 1382 | 2770 | - | 2.A.66.1.33 |
| CAZyme | Rep_3459_c_113 | Rep_3459_c_113_4 | 3066 | 4406 | + | GH25 |
| NULL(UNKNOWN) | Rep_3459_c_113 | Rep_3459_c_113_5 | 4514 | 4765 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3459_c_113 | Rep_3459_c_113_6 | 4916 | 6292 | - | 2.A.66.1.37 |
Gene ID: Rep_3459_c_113_1
Type: CAZyme
Location: 125 - 748 (-)
Type: CAZyme
Location: 125 - 748 (-)
Gene ID: Rep_3459_c_113_2
Type:
Location: 763 - 1395 (-)
Type:
Location: 763 - 1395 (-)
Gene ID: Rep_3459_c_113_3
Type: TC
Location: 1382 - 2770 (-)
Type: TC
Location: 1382 - 2770 (-)
Gene ID: Rep_3459_c_113_4
Type: CAZyme
Location: 3066 - 4406 (+)
Type: CAZyme
Location: 3066 - 4406 (+)
Gene ID: Rep_3459_c_113_5
Type:
Location: 4514 - 4765 (-)
Type:
Location: 4514 - 4765 (-)
Gene ID: Rep_3459_c_113_6
Type: TC
Location: 4916 - 6292 (-)
Type: TC
Location: 4916 - 6292 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp017935365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.