Cluster: Rep_3459_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3459
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3459_c_93 | Rep_3459_c_93_2 | 1080 | 2141 | + | CE4 |
| pfam | Rep_3459_c_93 | Rep_3459_c_93_3 | 2255 | 3163 | + | DAGK_cat | YegS_C |
| NULL(UNKNOWN) | Rep_3459_c_93 | Rep_3459_c_93_4 | 3160 | 3546 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3459_c_93 | Rep_3459_c_93_5 | 4674 | 6092 | + | 9.B.18.1.2 |
Gene ID: Rep_3459_c_93_2
Type: CAZyme
Location: 1080 - 2141 (+)
Type: CAZyme
Location: 1080 - 2141 (+)
Gene ID: Rep_3459_c_93_3
Type: pfam
Location: 2255 - 3163 (+)
Type: pfam
Location: 2255 - 3163 (+)
Gene ID: Rep_3459_c_93_4
Type:
Location: 3160 - 3546 (+)
Type:
Location: 3160 - 3546 (+)
Gene ID: Rep_3459_c_93_5
Type: TC
Location: 4674 - 6092 (+)
Type: TC
Location: 4674 - 6092 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp017935365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.