Cluster: Rep_3459_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3459
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3459_c_88 | Rep_3459_c_88_19 | 20096 | 20836 | - | 3.A.1.103.1 |
| TC | Rep_3459_c_88 | Rep_3459_c_88_20 | 20850 | 21650 | - | 3.A.1.103.4 |
| CAZyme | Rep_3459_c_88 | Rep_3459_c_88_21 | 21662 | 22684 | - | GT2 |
| CAZyme | Rep_3459_c_88 | Rep_3459_c_88_22 | 22684 | 23484 | - | GT2 |
| TC | Rep_3459_c_88 | Rep_3459_c_88_23 | 23681 | 25642 | - | 9.B.34.1.2 |
Gene ID: Rep_3459_c_88_19
Type: TC
Location: 20096 - 20836 (-)
Type: TC
Location: 20096 - 20836 (-)
Gene ID: Rep_3459_c_88_20
Type: TC
Location: 20850 - 21650 (-)
Type: TC
Location: 20850 - 21650 (-)
Gene ID: Rep_3459_c_88_21
Type: CAZyme
Location: 21662 - 22684 (-)
Type: CAZyme
Location: 21662 - 22684 (-)
Gene ID: Rep_3459_c_88_22
Type: CAZyme
Location: 22684 - 23484 (-)
Type: CAZyme
Location: 22684 - 23484 (-)
Gene ID: Rep_3459_c_88_23
Type: TC
Location: 23681 - 25642 (-)
Type: TC
Location: 23681 - 25642 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp017935365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.