Cluster: Rep_3459_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3459
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3459_c_88 | Rep_3459_c_88_5 | 2998 | 5499 | - | GH94 |
| TF | Rep_3459_c_88 | Rep_3459_c_88_6 | 5844 | 6698 | + | HTH_AraC | HTH_AraC |
| TC | Rep_3459_c_88 | Rep_3459_c_88_7 | 6700 | 7557 | + | 2.A.7.2.1 |
Gene ID: Rep_3459_c_88_5
Type: CAZyme
Location: 2998 - 5499 (-)
Type: CAZyme
Location: 2998 - 5499 (-)
Gene ID: Rep_3459_c_88_6
Type: TF
Location: 5844 - 6698 (+)
Type: TF
Location: 5844 - 6698 (+)
Gene ID: Rep_3459_c_88_7
Type: TC
Location: 6700 - 7557 (+)
Type: TC
Location: 6700 - 7557 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp017935365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.