Cluster: Rep_3459_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3459
- CGC Family ID: CGCFAM_04512
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3459_c_76 | Rep_3459_c_76_2 | 314 | 1489 | + | GH130_1 |
| NULL(UNKNOWN) | Rep_3459_c_76 | Rep_3459_c_76_3 | 1540 | 2202 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3459_c_76 | Rep_3459_c_76_4 | 2394 | 3086 | - | 1.C.82.1.1 |
Gene ID: Rep_3459_c_76_2
Type: CAZyme
Location: 314 - 1489 (+)
Type: CAZyme
Location: 314 - 1489 (+)
Gene ID: Rep_3459_c_76_3
Type:
Location: 1540 - 2202 (+)
Type:
Location: 1540 - 2202 (+)
Gene ID: Rep_3459_c_76_4
Type: TC
Location: 2394 - 3086 (-)
Type: TC
Location: 2394 - 3086 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp017935365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.