Cluster: Rep_3457_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_327 | 413439 | 415151 | - | CBM2 | GH5_2 |
| NULL(UNKNOWN) | Rep_3457_c_0 | Rep_3457_c_0_328 | 415227 | 416024 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3457_c_0 | Rep_3457_c_0_329 | 416310 | 416873 | + | 3.A.1.25.2 |
| TC | Rep_3457_c_0 | Rep_3457_c_0_330 | 417224 | 418582 | + | 2.A.66.1.37 |
Gene ID: Rep_3457_c_0_327
Type: CAZyme
Location: 413439 - 415151 (-)
Type: CAZyme
Location: 413439 - 415151 (-)
Gene ID: Rep_3457_c_0_328
Type:
Location: 415227 - 416024 (-)
Type:
Location: 415227 - 416024 (-)
Gene ID: Rep_3457_c_0_329
Type: TC
Location: 416310 - 416873 (+)
Type: TC
Location: 416310 - 416873 (+)
Gene ID: Rep_3457_c_0_330
Type: TC
Location: 417224 - 418582 (+)
Type: TC
Location: 417224 - 418582 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E siraeum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.