Cluster: Rep_3457_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_220 | 289287 | 290342 | - | CE4 |
| pfam | Rep_3457_c_0 | Rep_3457_c_0_221 | 290480 | 291664 | - | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| TC | Rep_3457_c_0 | Rep_3457_c_0_222 | 291766 | 293613 | - | 1.A.33.1.4 |
| TC | Rep_3457_c_0 | Rep_3457_c_0_223 | 293687 | 294247 | - | 3.A.8.1.1 |
Gene ID: Rep_3457_c_0_220
Type: CAZyme
Location: 289287 - 290342 (-)
Type: CAZyme
Location: 289287 - 290342 (-)
Gene ID: Rep_3457_c_0_221
Type: pfam
Location: 290480 - 291664 (-)
Type: pfam
Location: 290480 - 291664 (-)
Gene ID: Rep_3457_c_0_222
Type: TC
Location: 291766 - 293613 (-)
Type: TC
Location: 291766 - 293613 (-)
Gene ID: Rep_3457_c_0_223
Type: TC
Location: 293687 - 294247 (-)
Type: TC
Location: 293687 - 294247 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E siraeum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3457_c_0_220 | vegan > omnivore | 1.14041 | 0.04766 |