Cluster: Rep_3457_CGC38
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3457_c_0 | Rep_3457_c_0_2967 | 3242162 | 3242731 | + | 2.A.107.1.2 |
| STP | Rep_3457_c_0 | Rep_3457_c_0_2968 | 3242800 | 3243420 | - | HD |
| pfam | Rep_3457_c_0 | Rep_3457_c_0_2969 | 3243489 | 3244412 | - | Bactofilin | Bactofilin |
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_2970 | 3244439 | 3245491 | - | CE4 |
Gene ID: Rep_3457_c_0_2967
Type: TC
Location: 3242162 - 3242731 (+)
Type: TC
Location: 3242162 - 3242731 (+)
Gene ID: Rep_3457_c_0_2968
Type: STP
Location: 3242800 - 3243420 (-)
Type: STP
Location: 3242800 - 3243420 (-)
Gene ID: Rep_3457_c_0_2969
Type: pfam
Location: 3243489 - 3244412 (-)
Type: pfam
Location: 3243489 - 3244412 (-)
Gene ID: Rep_3457_c_0_2970
Type: CAZyme
Location: 3244439 - 3245491 (-)
Type: CAZyme
Location: 3244439 - 3245491 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E siraeum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.