Cluster: Rep_3457_CGC36
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_2834 | 3089878 | 3091857 | - | CBM2 | GH5_1 |
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_2835 | 3091879 | 3093180 | - | GH32 |
| TC | Rep_3457_c_0 | Rep_3457_c_0_2836 | 3093287 | 3094195 | - | 1.A.23.2.1 |
Gene ID: Rep_3457_c_0_2834
Type: CAZyme
Location: 3089878 - 3091857 (-)
Type: CAZyme
Location: 3089878 - 3091857 (-)
Gene ID: Rep_3457_c_0_2835
Type: CAZyme
Location: 3091879 - 3093180 (-)
Type: CAZyme
Location: 3091879 - 3093180 (-)
Gene ID: Rep_3457_c_0_2836
Type: TC
Location: 3093287 - 3094195 (-)
Type: TC
Location: 3093287 - 3094195 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E siraeum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3457_c_0_2834 | vegetarian > omnivore | 1.01366 | 0.03956 |