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Cluster: Rep_3457_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3457_c_0 Rep_3457_c_0_2539 2804996 2806249 - GH3
TC Rep_3457_c_0 Rep_3457_c_0_2540 2806194 2807960 - 3.A.1.106.3
TC Rep_3457_c_0 Rep_3457_c_0_2541 2807961 2809715 - 3.A.1.106.3
Gene ID: Rep_3457_c_0_2539
Type: CAZyme
Location: 2804996 - 2806249 (-)
Gene ID: Rep_3457_c_0_2540
Type: TC
Location: 2806194 - 2807960 (-)
Gene ID: Rep_3457_c_0_2541
Type: TC
Location: 2807961 - 2809715 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_3457_c_0_2540 vegan > omnivore 1.17144 0.03101

🧭 Explore Read Mapping of CGC

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