Cluster: Rep_3457_CGC28
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3457_c_0 | Rep_3457_c_0_2447 | 2706298 | 2707149 | + | 2.A.115.1.5 |
| peptidase | Rep_3457_c_0 | Rep_3457_c_0_2448 | 2707173 | 2707904 | + | M20.UNW |
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_2449 | 2707987 | 2709888 | - | GH127 |
Gene ID: Rep_3457_c_0_2447
Type: TC
Location: 2706298 - 2707149 (+)
Type: TC
Location: 2706298 - 2707149 (+)
Gene ID: Rep_3457_c_0_2448
Type: peptidase
Location: 2707173 - 2707904 (+)
Type: peptidase
Location: 2707173 - 2707904 (+)
Gene ID: Rep_3457_c_0_2449
Type: CAZyme
Location: 2707987 - 2709888 (-)
Type: CAZyme
Location: 2707987 - 2709888 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E siraeum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.