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Cluster: Rep_3457_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3457_c_0 Rep_3457_c_0_2422 2684162 2684725 - 9.A.24.1.7
pfam Rep_3457_c_0 Rep_3457_c_0_2423 2684781 2685440 + DUF2461
TC Rep_3457_c_0 Rep_3457_c_0_2424 2685526 2686155 - 2.A.87.1.3
TF Rep_3457_c_0 Rep_3457_c_0_2425 2686858 2687088 - HTH_3
pfam Rep_3457_c_0 Rep_3457_c_0_2426 2687839 2689980 + S1 | RNB | OB_RNB
TC Rep_3457_c_0 Rep_3457_c_0_2427 2689999 2690562 + 1.A.22.1.1
NULL(UNKNOWN) Rep_3457_c_0 Rep_3457_c_0_2428 2690590 2691189 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_3457_c_0 Rep_3457_c_0_2429 2691325 2692500 + GH130_1
TC Rep_3457_c_0 Rep_3457_c_0_2430 2692684 2693376 - 1.C.82.1.1
Gene ID: Rep_3457_c_0_2422
Type: TC
Location: 2684162 - 2684725 (-)
Gene ID: Rep_3457_c_0_2423
Type: pfam
Location: 2684781 - 2685440 (+)
Gene ID: Rep_3457_c_0_2424
Type: TC
Location: 2685526 - 2686155 (-)
Gene ID: Rep_3457_c_0_2425
Type: TF
Location: 2686858 - 2687088 (-)
Gene ID: Rep_3457_c_0_2426
Type: pfam
Location: 2687839 - 2689980 (+)
Gene ID: Rep_3457_c_0_2427
Type: TC
Location: 2689999 - 2690562 (+)
Gene ID: Rep_3457_c_0_2428
Type:
Location: 2690590 - 2691189 (+)
Gene ID: Rep_3457_c_0_2429
Type: CAZyme
Location: 2691325 - 2692500 (+)
Gene ID: Rep_3457_c_0_2430
Type: TC
Location: 2692684 - 2693376 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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