Cluster: Rep_3457_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_2278 | 2519458 | 2520777 | - | GH13_20 |
| NULL(UNKNOWN) | Rep_3457_c_0 | Rep_3457_c_0_2279 | 2520800 | 2521132 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3457_c_0 | Rep_3457_c_0_2280 | 2521453 | 2521953 | + | 3.D.1.5.1 |
| STP | Rep_3457_c_0 | Rep_3457_c_0_2281 | 2521953 | 2522510 | + | HATPase_c |
| NULL(UNKNOWN) | Rep_3457_c_0 | Rep_3457_c_0_2282 | 2522536 | 2522904 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3457_c_0 | Rep_3457_c_0_2283 | 2522926 | 2524719 | + | 3.D.1.5.1 |
Gene ID: Rep_3457_c_0_2278
Type: CAZyme
Location: 2519458 - 2520777 (-)
Type: CAZyme
Location: 2519458 - 2520777 (-)
Gene ID: Rep_3457_c_0_2279
Type:
Location: 2520800 - 2521132 (-)
Type:
Location: 2520800 - 2521132 (-)
Gene ID: Rep_3457_c_0_2280
Type: TC
Location: 2521453 - 2521953 (+)
Type: TC
Location: 2521453 - 2521953 (+)
Gene ID: Rep_3457_c_0_2281
Type: STP
Location: 2521953 - 2522510 (+)
Type: STP
Location: 2521953 - 2522510 (+)
Gene ID: Rep_3457_c_0_2282
Type:
Location: 2522536 - 2522904 (+)
Type:
Location: 2522536 - 2522904 (+)
Gene ID: Rep_3457_c_0_2283
Type: TC
Location: 2522926 - 2524719 (+)
Type: TC
Location: 2522926 - 2524719 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E siraeum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.