Cluster: Rep_3457_CGC22
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3457
- CGC Family ID: CGCFAM_01662
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3457_c_0 | Rep_3457_c_0_1633 | 1833499 | 1835121 | + | 3.A.1.5.15 |
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_1634 | 1835236 | 1836075 | + | GT2 |
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_1635 | 1836156 | 1838489 | - | GH5_4 |
Gene ID: Rep_3457_c_0_1633
Type: TC
Location: 1833499 - 1835121 (+)
Type: TC
Location: 1833499 - 1835121 (+)
Gene ID: Rep_3457_c_0_1634
Type: CAZyme
Location: 1835236 - 1836075 (+)
Type: CAZyme
Location: 1835236 - 1836075 (+)
Gene ID: Rep_3457_c_0_1635
Type: CAZyme
Location: 1836156 - 1838489 (-)
Type: CAZyme
Location: 1836156 - 1838489 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E siraeum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.