Cluster: Rep_3457_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3457
- CGC Family ID: CGCFAM_02972
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3457_c_0 | Rep_3457_c_0_1523 | 1727082 | 1729076 | - | 1.B.52.2.1 |
| NULL(UNKNOWN) | Rep_3457_c_0 | Rep_3457_c_0_1524 | 1729294 | 1729563 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3457_c_0 | Rep_3457_c_0_1525 | 1730058 | 1731659 | + | Big_2 |
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_1526 | 1731911 | 1734595 | + | GH2 |
Gene ID: Rep_3457_c_0_1523
Type: TC
Location: 1727082 - 1729076 (-)
Type: TC
Location: 1727082 - 1729076 (-)
Gene ID: Rep_3457_c_0_1524
Type:
Location: 1729294 - 1729563 (-)
Type:
Location: 1729294 - 1729563 (-)
Gene ID: Rep_3457_c_0_1525
Type: pfam
Location: 1730058 - 1731659 (+)
Type: pfam
Location: 1730058 - 1731659 (+)
Gene ID: Rep_3457_c_0_1526
Type: CAZyme
Location: 1731911 - 1734595 (+)
Type: CAZyme
Location: 1731911 - 1734595 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E siraeum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.