Cluster: Rep_3457_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3457_c_0 | Rep_3457_c_0_1494 | 1688811 | 1689827 | + | 9.B.146.1.6 |
| TC | Rep_3457_c_0 | Rep_3457_c_0_1495 | 1689856 | 1691340 | + | 2.A.103.1.3 |
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_1496 | 1691367 | 1692488 | + | GT28 |
Gene ID: Rep_3457_c_0_1494
Type: TC
Location: 1688811 - 1689827 (+)
Type: TC
Location: 1688811 - 1689827 (+)
Gene ID: Rep_3457_c_0_1495
Type: TC
Location: 1689856 - 1691340 (+)
Type: TC
Location: 1689856 - 1691340 (+)
Gene ID: Rep_3457_c_0_1496
Type: CAZyme
Location: 1691367 - 1692488 (+)
Type: CAZyme
Location: 1691367 - 1692488 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E siraeum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.