Cluster: Rep_3457_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3457_c_0 | Rep_3457_c_0_45 | 52474 | 53331 | - | 2.A.7.2.1 |
| TF | Rep_3457_c_0 | Rep_3457_c_0_46 | 53335 | 54189 | - | HTH_AraC | HTH_AraC |
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_47 | 54535 | 57036 | + | GH94 |
Gene ID: Rep_3457_c_0_45
Type: TC
Location: 52474 - 53331 (-)
Type: TC
Location: 52474 - 53331 (-)
Gene ID: Rep_3457_c_0_46
Type: TF
Location: 53335 - 54189 (-)
Type: TF
Location: 53335 - 54189 (-)
Gene ID: Rep_3457_c_0_47
Type: CAZyme
Location: 54535 - 57036 (+)
Type: CAZyme
Location: 54535 - 57036 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E siraeum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.