Cluster: Rep_3457_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3457_c_0 | Rep_3457_c_0_914 | 1071745 | 1072410 | + | 3.A.3.1.8 |
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_915 | 1072621 | 1075020 | + | GT35 |
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_916 | 1075124 | 1077004 | + | GH13_39 |
Gene ID: Rep_3457_c_0_914
Type: TC
Location: 1071745 - 1072410 (+)
Type: TC
Location: 1071745 - 1072410 (+)
Gene ID: Rep_3457_c_0_915
Type: CAZyme
Location: 1072621 - 1075020 (+)
Type: CAZyme
Location: 1072621 - 1075020 (+)
Gene ID: Rep_3457_c_0_916
Type: CAZyme
Location: 1075124 - 1077004 (+)
Type: CAZyme
Location: 1075124 - 1077004 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E siraeum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.