Cluster: Rep_3457_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3457_c_0 | Rep_3457_c_0_862 | 1008502 | 1009548 | - | 1.A.54.5.3 |
| TC | Rep_3457_c_0 | Rep_3457_c_0_863 | 1009844 | 1011535 | + | 3.A.11.1.3 |
| TC | Rep_3457_c_0 | Rep_3457_c_0_864 | 1011584 | 1012645 | + | 3.A.15.2.1 |
| pfam | Rep_3457_c_0 | Rep_3457_c_0_865 | 1012728 | 1013183 | + | Tyr_Deacylase |
| pfam | Rep_3457_c_0 | Rep_3457_c_0_866 | 1013408 | 1014172 | + | APH |
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_867 | 1014445 | 1016823 | + | GT51 |
Gene ID: Rep_3457_c_0_862
Type: TC
Location: 1008502 - 1009548 (-)
Type: TC
Location: 1008502 - 1009548 (-)
Gene ID: Rep_3457_c_0_863
Type: TC
Location: 1009844 - 1011535 (+)
Type: TC
Location: 1009844 - 1011535 (+)
Gene ID: Rep_3457_c_0_864
Type: TC
Location: 1011584 - 1012645 (+)
Type: TC
Location: 1011584 - 1012645 (+)
Gene ID: Rep_3457_c_0_865
Type: pfam
Location: 1012728 - 1013183 (+)
Type: pfam
Location: 1012728 - 1013183 (+)
Gene ID: Rep_3457_c_0_866
Type: pfam
Location: 1013408 - 1014172 (+)
Type: pfam
Location: 1013408 - 1014172 (+)
Gene ID: Rep_3457_c_0_867
Type: CAZyme
Location: 1014445 - 1016823 (+)
Type: CAZyme
Location: 1014445 - 1016823 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E siraeum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.