Cluster: Rep_3457_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_852 | 996721 | 997698 | - | GT2 |
| CAZyme | Rep_3457_c_0 | Rep_3457_c_0_853 | 997923 | 998780 | + | CE4 |
| NULL(UNKNOWN) | Rep_3457_c_0 | Rep_3457_c_0_854 | 999153 | 999278 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3457_c_0 | Rep_3457_c_0_855 | 999682 | 1000389 | + | PNP_UDP_1 |
| TC | Rep_3457_c_0 | Rep_3457_c_0_856 | 1000682 | 1001881 | + | 3.A.11.1.3 |
Gene ID: Rep_3457_c_0_852
Type: CAZyme
Location: 996721 - 997698 (-)
Type: CAZyme
Location: 996721 - 997698 (-)
Gene ID: Rep_3457_c_0_853
Type: CAZyme
Location: 997923 - 998780 (+)
Type: CAZyme
Location: 997923 - 998780 (+)
Gene ID: Rep_3457_c_0_854
Type:
Location: 999153 - 999278 (-)
Type:
Location: 999153 - 999278 (-)
Gene ID: Rep_3457_c_0_855
Type: pfam
Location: 999682 - 1000389 (+)
Type: pfam
Location: 999682 - 1000389 (+)
Gene ID: Rep_3457_c_0_856
Type: TC
Location: 1000682 - 1001881 (+)
Type: TC
Location: 1000682 - 1001881 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E siraeum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.