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Cluster: Rep_344_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_344_c_6 Rep_344_c_6_87 92918 93763 + 1.A.34.1.3
pfam Rep_344_c_6 Rep_344_c_6_88 93854 94393 + DUF4199
CAZyme Rep_344_c_6 Rep_344_c_6_89 94451 95458 + GT2
pfam Rep_344_c_6 Rep_344_c_6_90 95497 96102 + DUF4254
CAZyme Rep_344_c_6 Rep_344_c_6_91 96132 97190 + GT9
Gene ID: Rep_344_c_6_87
Type: TC
Location: 92918 - 93763 (+)
Gene ID: Rep_344_c_6_88
Type: pfam
Location: 93854 - 94393 (+)
Gene ID: Rep_344_c_6_89
Type: CAZyme
Location: 94451 - 95458 (+)
Gene ID: Rep_344_c_6_90
Type: pfam
Location: 95497 - 96102 (+)
Gene ID: Rep_344_c_6_91
Type: CAZyme
Location: 96132 - 97190 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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