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Cluster: Rep_344_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_344_c_6 Rep_344_c_6_13 15544 16548 + GT8
CAZyme Rep_344_c_6 Rep_344_c_6_14 16833 17768 + GT8
CAZyme Rep_344_c_6 Rep_344_c_6_15 17826 18743 + GT2
TC Rep_344_c_6 Rep_344_c_6_16 18723 20126 - 1.B.17.3.4
TC Rep_344_c_6 Rep_344_c_6_17 20126 21259 - 2.A.6.2.4
Gene ID: Rep_344_c_6_13
Type: CAZyme
Location: 15544 - 16548 (+)
Gene ID: Rep_344_c_6_14
Type: CAZyme
Location: 16833 - 17768 (+)
Gene ID: Rep_344_c_6_15
Type: CAZyme
Location: 17826 - 18743 (+)
Gene ID: Rep_344_c_6_16
Type: TC
Location: 18723 - 20126 (-)
Gene ID: Rep_344_c_6_17
Type: TC
Location: 20126 - 21259 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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