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Cluster: Rep_344_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_344_c_30 Rep_344_c_30_3 3746 5575 - 2.A.1.53.5
sulfatase Rep_344_c_30 Rep_344_c_30_4 5645 5986 - S1_15
STP Rep_344_c_30 Rep_344_c_30_5 5979 6281 - NTP_transf_2
TC Rep_344_c_30 Rep_344_c_30_6 6376 7506 + 2.A.86.1.6
pfam Rep_344_c_30 Rep_344_c_30_7 7522 8625 + YceG
CAZyme Rep_344_c_30 Rep_344_c_30_8 8711 10954 + CBM35
Gene ID: Rep_344_c_30_3
Type: TC
Location: 3746 - 5575 (-)
Gene ID: Rep_344_c_30_4
Type: sulfatase
Location: 5645 - 5986 (-)
Gene ID: Rep_344_c_30_5
Type: STP
Location: 5979 - 6281 (-)
Gene ID: Rep_344_c_30_6
Type: TC
Location: 6376 - 7506 (+)
Gene ID: Rep_344_c_30_7
Type: pfam
Location: 7522 - 8625 (+)
Gene ID: Rep_344_c_30_8
Type: CAZyme
Location: 8711 - 10954 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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