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Cluster: Rep_344_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_344_c_25 Rep_344_c_25_3 2442 3623 + 9.B.146.1.4
TC Rep_344_c_25 Rep_344_c_25_4 3677 4504 + 1.B.18.3.3
TC Rep_344_c_25 Rep_344_c_25_5 4536 6947 + 8.A.3.3.4
CAZyme Rep_344_c_25 Rep_344_c_25_6 7015 7794 + GT2
TC Rep_344_c_25 Rep_344_c_25_7 7791 10076 + 1.B.14.8.4
NULL(UNKNOWN) Rep_344_c_25 Rep_344_c_25_8 10136 10678 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_344_c_25 Rep_344_c_25_9 11033 11842 + 1.A.30.3.1
Gene ID: Rep_344_c_25_3
Type: TC
Location: 2442 - 3623 (+)
Gene ID: Rep_344_c_25_4
Type: TC
Location: 3677 - 4504 (+)
Gene ID: Rep_344_c_25_5
Type: TC
Location: 4536 - 6947 (+)
Gene ID: Rep_344_c_25_6
Type: CAZyme
Location: 7015 - 7794 (+)
Gene ID: Rep_344_c_25_7
Type: TC
Location: 7791 - 10076 (+)
Gene ID: Rep_344_c_25_8
Type:
Location: 10136 - 10678 (+)
Gene ID: Rep_344_c_25_9
Type: TC
Location: 11033 - 11842 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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