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Cluster: Rep_344_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_344_c_23 Rep_344_c_23_46 49270 50706 - 2.A.66.1.32
TF Rep_344_c_23 Rep_344_c_23_47 50784 51635 + HTH_AraC | HTH_AraC
STP Rep_344_c_23 Rep_344_c_23_48 51686 52618 - Pribosyltran
CAZyme Rep_344_c_23 Rep_344_c_23_49 52684 54435 - GH13_38
Gene ID: Rep_344_c_23_46
Type: TC
Location: 49270 - 50706 (-)
Gene ID: Rep_344_c_23_47
Type: TF
Location: 50784 - 51635 (+)
Gene ID: Rep_344_c_23_48
Type: STP
Location: 51686 - 52618 (-)
Gene ID: Rep_344_c_23_49
Type: CAZyme
Location: 52684 - 54435 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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