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Cluster: Rep_344_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_344_c_17 Rep_344_c_17_8 9310 10572 + 9.B.146.1.3
pfam Rep_344_c_17 Rep_344_c_17_9 10627 11997 + Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N
TC Rep_344_c_17 Rep_344_c_17_10 12015 13439 + 2.A.103.1.2
CAZyme Rep_344_c_17 Rep_344_c_17_11 13468 14571 + GT28
Gene ID: Rep_344_c_17_8
Type: TC
Location: 9310 - 10572 (+)
Gene ID: Rep_344_c_17_9
Type: pfam
Location: 10627 - 11997 (+)
Gene ID: Rep_344_c_17_10
Type: TC
Location: 12015 - 13439 (+)
Gene ID: Rep_344_c_17_11
Type: CAZyme
Location: 13468 - 14571 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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