Cluster: Rep_3445_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3445
- CGC Family ID: CGCFAM_00002
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3445_c_195 | Rep_3445_c_195_2 | 364 | 1299 | - | GT2 |
| CAZyme | Rep_3445_c_195 | Rep_3445_c_195_3 | 1430 | 2527 | - | GT4 |
| pfam | Rep_3445_c_195 | Rep_3445_c_195_4 | 2524 | 3141 | - | Hexapep | PglD_N |
| TC | Rep_3445_c_195 | Rep_3445_c_195_5 | 3128 | 3766 | - | 9.B.18.1.2 |
Gene ID: Rep_3445_c_195_2
Type: CAZyme
Location: 364 - 1299 (-)
Type: CAZyme
Location: 364 - 1299 (-)
Gene ID: Rep_3445_c_195_3
Type: CAZyme
Location: 1430 - 2527 (-)
Type: CAZyme
Location: 1430 - 2527 (-)
Gene ID: Rep_3445_c_195_4
Type: pfam
Location: 2524 - 3141 (-)
Type: pfam
Location: 2524 - 3141 (-)
Gene ID: Rep_3445_c_195_5
Type: TC
Location: 3128 - 3766 (-)
Type: TC
Location: 3128 - 3766 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.