Cluster: Rep_3445_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3445
- CGC Family ID: CGCFAM_05160
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3445_c_135 | Rep_3445_c_135_1 | 34 | 3180 | - | GH13_28 |
| TC | Rep_3445_c_135 | Rep_3445_c_135_2 | 3557 | 4972 | + | 3.A.1.11.8 |
| TC | Rep_3445_c_135 | Rep_3445_c_135_3 | 4975 | 5766 | + | 3.A.1.11.2 |
| TC | Rep_3445_c_135 | Rep_3445_c_135_4 | 5766 | 6281 | + | 3.A.1.11.8 |
Gene ID: Rep_3445_c_135_1
Type: CAZyme
Location: 34 - 3180 (-)
Type: CAZyme
Location: 34 - 3180 (-)
Gene ID: Rep_3445_c_135_2
Type: TC
Location: 3557 - 4972 (+)
Type: TC
Location: 3557 - 4972 (+)
Gene ID: Rep_3445_c_135_3
Type: TC
Location: 4975 - 5766 (+)
Type: TC
Location: 4975 - 5766 (+)
Gene ID: Rep_3445_c_135_4
Type: TC
Location: 5766 - 6281 (+)
Type: TC
Location: 5766 - 6281 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.