Cluster: Rep_3445_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3445
- CGC Family ID: CGCFAM_02246
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3445_c_102 | Rep_3445_c_102_3 | 2038 | 3984 | + | 4.A.2.1.20 |
| STP | Rep_3445_c_102 | Rep_3445_c_102_4 | 4098 | 4361 | + | PTS-HPr |
| TC | Rep_3445_c_102 | Rep_3445_c_102_5 | 4428 | 6125 | + | 8.A.7.1.1 |
| CAZyme | Rep_3445_c_102 | Rep_3445_c_102_6 | 6437 | 8254 | + | CBM74 |
Gene ID: Rep_3445_c_102_3
Type: TC
Location: 2038 - 3984 (+)
Type: TC
Location: 2038 - 3984 (+)
Gene ID: Rep_3445_c_102_4
Type: STP
Location: 4098 - 4361 (+)
Type: STP
Location: 4098 - 4361 (+)
Gene ID: Rep_3445_c_102_5
Type: TC
Location: 4428 - 6125 (+)
Type: TC
Location: 4428 - 6125 (+)
Gene ID: Rep_3445_c_102_6
Type: CAZyme
Location: 6437 - 8254 (+)
Type: CAZyme
Location: 6437 - 8254 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.