Cluster: Rep_3445_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3445
- CGC Family ID: CGCFAM_03648
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3445_c_264 | Rep_3445_c_264_6 | 2982 | 4037 | - | GH25 |
| STP | Rep_3445_c_264 | Rep_3445_c_264_7 | 4219 | 4752 | + | Nitroreductase |
| pfam | Rep_3445_c_264 | Rep_3445_c_264_8 | 4814 | 5125 | - | YbjQ_1 |
| TC | Rep_3445_c_264 | Rep_3445_c_264_9 | 5142 | 5903 | - | 2.A.6.3.6 |
Gene ID: Rep_3445_c_264_6
Type: CAZyme
Location: 2982 - 4037 (-)
Type: CAZyme
Location: 2982 - 4037 (-)
Gene ID: Rep_3445_c_264_7
Type: STP
Location: 4219 - 4752 (+)
Type: STP
Location: 4219 - 4752 (+)
Gene ID: Rep_3445_c_264_8
Type: pfam
Location: 4814 - 5125 (-)
Type: pfam
Location: 4814 - 5125 (-)
Gene ID: Rep_3445_c_264_9
Type: TC
Location: 5142 - 5903 (-)
Type: TC
Location: 5142 - 5903 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.