Cluster: Rep_3445_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3445
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3445_c_29 | Rep_3445_c_29_2 | 784 | 1806 | + | 3.A.1.141.2 |
| pfam | Rep_3445_c_29 | Rep_3445_c_29_3 | 1799 | 2617 | + | ABC2_membrane_6 |
| pfam | Rep_3445_c_29 | Rep_3445_c_29_4 | 2622 | 3422 | + | ABC2_membrane_6 |
| CAZyme | Rep_3445_c_29 | Rep_3445_c_29_5 | 3614 | 7315 | + | GH13_14 |
Gene ID: Rep_3445_c_29_2
Type: TC
Location: 784 - 1806 (+)
Type: TC
Location: 784 - 1806 (+)
Gene ID: Rep_3445_c_29_3
Type: pfam
Location: 1799 - 2617 (+)
Type: pfam
Location: 1799 - 2617 (+)
Gene ID: Rep_3445_c_29_4
Type: pfam
Location: 2622 - 3422 (+)
Type: pfam
Location: 2622 - 3422 (+)
Gene ID: Rep_3445_c_29_5
Type: CAZyme
Location: 3614 - 7315 (+)
Type: CAZyme
Location: 3614 - 7315 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.