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Cluster: Rep_343_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_343_c_58 Rep_343_c_58_11 6988 8442 - 2.A.2.3.5
CAZyme Rep_343_c_58 Rep_343_c_58_12 8463 9629 - GH130_1
CAZyme Rep_343_c_58 Rep_343_c_58_13 9660 10775 - GH26
CAZyme Rep_343_c_58 Rep_343_c_58_14 10849 12672 + GH110
Gene ID: Rep_343_c_58_11
Type: TC
Location: 6988 - 8442 (-)
Gene ID: Rep_343_c_58_12
Type: CAZyme
Location: 8463 - 9629 (-)
Gene ID: Rep_343_c_58_13
Type: CAZyme
Location: 9660 - 10775 (-)
Gene ID: Rep_343_c_58_14
Type: CAZyme
Location: 10849 - 12672 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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