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Cluster: Rep_343_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_343_c_33 Rep_343_c_33_21 28148 28735 - 4.B.1.1.4
TC Rep_343_c_33 Rep_343_c_33_22 28737 30992 - 1.B.14.14.1
pfam Rep_343_c_33 Rep_343_c_33_23 31153 32019 - Acetyltransf_1 | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
TC Rep_343_c_33 Rep_343_c_33_24 32102 33055 + 8.A.5.1.6
STP Rep_343_c_33 Rep_343_c_33_25 33167 34045 - PfkB
TC Rep_343_c_33 Rep_343_c_33_26 34069 35256 - 2.A.1.7.17
CAZyme Rep_343_c_33 Rep_343_c_33_27 35266 37107 - GH32
TF Rep_343_c_33 Rep_343_c_33_28 37294 40020 + HTH_AraC | HTH_AraC
TC Rep_343_c_33 Rep_343_c_33_29 40222 43281 + 1.B.14.6.1
pfam Rep_343_c_33 Rep_343_c_33_30 43311 45077 + SusD_RagB | SusD-like_3
CAZyme Rep_343_c_33 Rep_343_c_33_31 45174 46655 + GH32
Gene ID: Rep_343_c_33_21
Type: TC
Location: 28148 - 28735 (-)
Gene ID: Rep_343_c_33_22
Type: TC
Location: 28737 - 30992 (-)
Gene ID: Rep_343_c_33_23
Type: pfam
Location: 31153 - 32019 (-)
Gene ID: Rep_343_c_33_24
Type: TC
Location: 32102 - 33055 (+)
Gene ID: Rep_343_c_33_25
Type: STP
Location: 33167 - 34045 (-)
Gene ID: Rep_343_c_33_26
Type: TC
Location: 34069 - 35256 (-)
Gene ID: Rep_343_c_33_27
Type: CAZyme
Location: 35266 - 37107 (-)
Gene ID: Rep_343_c_33_28
Type: TF
Location: 37294 - 40020 (+)
Gene ID: Rep_343_c_33_29
Type: TC
Location: 40222 - 43281 (+)
Gene ID: Rep_343_c_33_30
Type: pfam
Location: 43311 - 45077 (+)
Gene ID: Rep_343_c_33_31
Type: CAZyme
Location: 45174 - 46655 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Paramuribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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