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Cluster: Rep_343_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_343_c_0 Rep_343_c_0_15 15171 16958 + GH123
pfam Rep_343_c_0 Rep_343_c_0_16 16982 18025 - Radical_SAM | RlmN_N
TC Rep_343_c_0 Rep_343_c_0_17 18580 21831 + 1.B.14.6.13
TC Rep_343_c_0 Rep_343_c_0_18 21870 23669 + 8.A.46.2.1
NULL(UNKNOWN) Rep_343_c_0 Rep_343_c_0_19 23713 25635 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_343_c_0 Rep_343_c_0_20 25756 29625 + GH85
CAZyme Rep_343_c_0 Rep_343_c_0_21 29728 33648 + GH85
CAZyme Rep_343_c_0 Rep_343_c_0_22 33743 36847 + GH2
Gene ID: Rep_343_c_0_15
Type: CAZyme
Location: 15171 - 16958 (+)
Gene ID: Rep_343_c_0_16
Type: pfam
Location: 16982 - 18025 (-)
Gene ID: Rep_343_c_0_17
Type: TC
Location: 18580 - 21831 (+)
Gene ID: Rep_343_c_0_18
Type: TC
Location: 21870 - 23669 (+)
Gene ID: Rep_343_c_0_19
Type:
Location: 23713 - 25635 (+)
Gene ID: Rep_343_c_0_20
Type: CAZyme
Location: 25756 - 29625 (+)
Gene ID: Rep_343_c_0_21
Type: CAZyme
Location: 29728 - 33648 (+)
Gene ID: Rep_343_c_0_22
Type: CAZyme
Location: 33743 - 36847 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Paramuribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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