Cluster: Rep_3437_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3437
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3437_c_214 | Rep_3437_c_214_1 | 121 | 2034 | + | CBM48 | GH13_9 |
| pfam | Rep_3437_c_214 | Rep_3437_c_214_2 | 2140 | 3351 | + | NTP_transferase | Hexapep_GlmU |
| pfam | Rep_3437_c_214 | Rep_3437_c_214_3 | 3341 | 4450 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | Rep_3437_c_214 | Rep_3437_c_214_4 | 4466 | 5893 | + | GT5 |
| TC | Rep_3437_c_214 | Rep_3437_c_214_5 | 6371 | 7642 | - | 2.A.49.9.2 |
Gene ID: Rep_3437_c_214_1
Type: CAZyme
Location: 121 - 2034 (+)
Type: CAZyme
Location: 121 - 2034 (+)
Gene ID: Rep_3437_c_214_2
Type: pfam
Location: 2140 - 3351 (+)
Type: pfam
Location: 2140 - 3351 (+)
Gene ID: Rep_3437_c_214_3
Type: pfam
Location: 3341 - 4450 (+)
Type: pfam
Location: 3341 - 4450 (+)
Gene ID: Rep_3437_c_214_4
Type: CAZyme
Location: 4466 - 5893 (+)
Type: CAZyme
Location: 4466 - 5893 (+)
Gene ID: Rep_3437_c_214_5
Type: TC
Location: 6371 - 7642 (-)
Type: TC
Location: 6371 - 7642 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp902766885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.