Cluster: Rep_3437_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3437
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3437_c_210 | Rep_3437_c_210_2 | 1440 | 2909 | + | 3.D.10.1.4 |
| pfam | Rep_3437_c_210 | Rep_3437_c_210_3 | 2906 | 3748 | + | QRPTase_C | QRPTase_N |
| pfam | Rep_3437_c_210 | Rep_3437_c_210_4 | 3755 | 4387 | + | Thia_YuaJ |
| CAZyme | Rep_3437_c_210 | Rep_3437_c_210_5 | 4541 | 6628 | + | GH13_11 |
Gene ID: Rep_3437_c_210_2
Type: TC
Location: 1440 - 2909 (+)
Type: TC
Location: 1440 - 2909 (+)
Gene ID: Rep_3437_c_210_3
Type: pfam
Location: 2906 - 3748 (+)
Type: pfam
Location: 2906 - 3748 (+)
Gene ID: Rep_3437_c_210_4
Type: pfam
Location: 3755 - 4387 (+)
Type: pfam
Location: 3755 - 4387 (+)
Gene ID: Rep_3437_c_210_5
Type: CAZyme
Location: 4541 - 6628 (+)
Type: CAZyme
Location: 4541 - 6628 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp902766885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.