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Cluster: Rep_3437_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3437_c_146 Rep_3437_c_146_1 1 1104 - 2.A.1.1.115
pfam Rep_3437_c_146 Rep_3437_c_146_2 1142 1843 - Ribul_P_3_epim
pfam Rep_3437_c_146 Rep_3437_c_146_3 1875 2975 - ADH_zinc_N | ADH_N | Glu_dehyd_C
TC Rep_3437_c_146 Rep_3437_c_146_4 3595 5001 + 2.A.66.1.33
TF Rep_3437_c_146 Rep_3437_c_146_5 5294 5836 + SpoVT_AbrB
CAZyme Rep_3437_c_146 Rep_3437_c_146_6 5943 8381 - GH13_42
Gene ID: Rep_3437_c_146_1
Type: TC
Location: 1 - 1104 (-)
Gene ID: Rep_3437_c_146_2
Type: pfam
Location: 1142 - 1843 (-)
Gene ID: Rep_3437_c_146_3
Type: pfam
Location: 1875 - 2975 (-)
Gene ID: Rep_3437_c_146_4
Type: TC
Location: 3595 - 5001 (+)
Gene ID: Rep_3437_c_146_5
Type: TF
Location: 5294 - 5836 (+)
Gene ID: Rep_3437_c_146_6
Type: CAZyme
Location: 5943 - 8381 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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