Cluster: Rep_3437_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3437
- CGC Family ID: CGCFAM_00814
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3437_c_55 | Rep_3437_c_55_2 | 626 | 1723 | - | GT4 |
| pfam | Rep_3437_c_55 | Rep_3437_c_55_3 | 1716 | 2648 | - | Transket_pyr | Transketolase_C |
| pfam | Rep_3437_c_55 | Rep_3437_c_55_4 | 2645 | 3580 | - | Transketolase_N | E1_dh | TPP_enzyme_C | XFP_N |
| TC | Rep_3437_c_55 | Rep_3437_c_55_5 | 3646 | 4779 | - | 9.B.183.1.9 |
| TC | Rep_3437_c_55 | Rep_3437_c_55_6 | 4794 | 5738 | - | 8.A.5.1.4 |
| TC | Rep_3437_c_55 | Rep_3437_c_55_7 | 5719 | 6447 | - | 9.B.18.1.2 |
Gene ID: Rep_3437_c_55_2
Type: CAZyme
Location: 626 - 1723 (-)
Type: CAZyme
Location: 626 - 1723 (-)
Gene ID: Rep_3437_c_55_3
Type: pfam
Location: 1716 - 2648 (-)
Type: pfam
Location: 1716 - 2648 (-)
Gene ID: Rep_3437_c_55_4
Type: pfam
Location: 2645 - 3580 (-)
Type: pfam
Location: 2645 - 3580 (-)
Gene ID: Rep_3437_c_55_5
Type: TC
Location: 3646 - 4779 (-)
Type: TC
Location: 3646 - 4779 (-)
Gene ID: Rep_3437_c_55_6
Type: TC
Location: 4794 - 5738 (-)
Type: TC
Location: 4794 - 5738 (-)
Gene ID: Rep_3437_c_55_7
Type: TC
Location: 5719 - 6447 (-)
Type: TC
Location: 5719 - 6447 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp902766885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.