Cluster: Rep_3436_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3436
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3436_c_125 | Rep_3436_c_125_3 | 1879 | 2889 | - | 9.A.11.1.1 |
| pfam | Rep_3436_c_125 | Rep_3436_c_125_4 | 2953 | 4647 | - | VanW |
| CAZyme | Rep_3436_c_125 | Rep_3436_c_125_5 | 5045 | 6169 | + | GT28 |
Gene ID: Rep_3436_c_125_3
Type: TC
Location: 1879 - 2889 (-)
Type: TC
Location: 1879 - 2889 (-)
Gene ID: Rep_3436_c_125_4
Type: pfam
Location: 2953 - 4647 (-)
Type: pfam
Location: 2953 - 4647 (-)
Gene ID: Rep_3436_c_125_5
Type: CAZyme
Location: 5045 - 6169 (+)
Type: CAZyme
Location: 5045 - 6169 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.