Cluster: Rep_3436_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3436
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3436_c_108 | Rep_3436_c_108_14 | 12652 | 14121 | + | 3.D.10.1.4 |
| pfam | Rep_3436_c_108 | Rep_3436_c_108_15 | 14118 | 14960 | + | QRPTase_C | QRPTase_N |
| pfam | Rep_3436_c_108 | Rep_3436_c_108_16 | 15023 | 15592 | + | Thia_YuaJ |
| CAZyme | Rep_3436_c_108 | Rep_3436_c_108_17 | 15754 | 17841 | + | GH13_11 |
Gene ID: Rep_3436_c_108_14
Type: TC
Location: 12652 - 14121 (+)
Type: TC
Location: 12652 - 14121 (+)
Gene ID: Rep_3436_c_108_15
Type: pfam
Location: 14118 - 14960 (+)
Type: pfam
Location: 14118 - 14960 (+)
Gene ID: Rep_3436_c_108_16
Type: pfam
Location: 15023 - 15592 (+)
Type: pfam
Location: 15023 - 15592 (+)
Gene ID: Rep_3436_c_108_17
Type: CAZyme
Location: 15754 - 17841 (+)
Type: CAZyme
Location: 15754 - 17841 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.