Cluster: Rep_3436_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3436
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3436_c_49 | Rep_3436_c_49_1 | 189 | 1832 | - | 4.C.1.1.6 |
| CAZyme | Rep_3436_c_49 | Rep_3436_c_49_2 | 2103 | 5651 | - | GH13_19 |
| TC | Rep_3436_c_49 | Rep_3436_c_49_3 | 6209 | 7603 | + | 3.A.1.1.45 |
| TC | Rep_3436_c_49 | Rep_3436_c_49_4 | 7765 | 8607 | + | 3.A.1.1.45 |
| TC | Rep_3436_c_49 | Rep_3436_c_49_5 | 8607 | 9485 | + | 3.A.1.1.45 |
Gene ID: Rep_3436_c_49_1
Type: TC
Location: 189 - 1832 (-)
Type: TC
Location: 189 - 1832 (-)
Gene ID: Rep_3436_c_49_2
Type: CAZyme
Location: 2103 - 5651 (-)
Type: CAZyme
Location: 2103 - 5651 (-)
Gene ID: Rep_3436_c_49_3
Type: TC
Location: 6209 - 7603 (+)
Type: TC
Location: 6209 - 7603 (+)
Gene ID: Rep_3436_c_49_4
Type: TC
Location: 7765 - 8607 (+)
Type: TC
Location: 7765 - 8607 (+)
Gene ID: Rep_3436_c_49_5
Type: TC
Location: 8607 - 9485 (+)
Type: TC
Location: 8607 - 9485 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.