Cluster: Rep_3436_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3436
- CGC Family ID: CGCFAM_03789
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3436_c_28 | Rep_3436_c_28_3 | 1768 | 2661 | + | 2.A.115.1.1 |
| pfam | Rep_3436_c_28 | Rep_3436_c_28_4 | 2715 | 3749 | - | Glycos_transf_2 | GtrA_DPMS_TM |
| CAZyme | Rep_3436_c_28 | Rep_3436_c_28_5 | 4024 | 6000 | + | GH13_28 |
Gene ID: Rep_3436_c_28_3
Type: TC
Location: 1768 - 2661 (+)
Type: TC
Location: 1768 - 2661 (+)
Gene ID: Rep_3436_c_28_4
Type: pfam
Location: 2715 - 3749 (-)
Type: pfam
Location: 2715 - 3749 (-)
Gene ID: Rep_3436_c_28_5
Type: CAZyme
Location: 4024 - 6000 (+)
Type: CAZyme
Location: 4024 - 6000 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.