Cluster: Rep_3436_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3436
- CGC Family ID: CGCFAM_00251
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3436_c_169 | Rep_3436_c_169_1 | 453 | 959 | + | 3.D.1.5.1 |
| TC | Rep_3436_c_169 | Rep_3436_c_169_2 | 963 | 2855 | + | 3.D.1.5.1 |
| STP | Rep_3436_c_169 | Rep_3436_c_169_3 | 2868 | 4604 | + | Fer4 |
| CAZyme | Rep_3436_c_169 | Rep_3436_c_169_4 | 4723 | 6657 | - | CBM74 |
Gene ID: Rep_3436_c_169_1
Type: TC
Location: 453 - 959 (+)
Type: TC
Location: 453 - 959 (+)
Gene ID: Rep_3436_c_169_2
Type: TC
Location: 963 - 2855 (+)
Type: TC
Location: 963 - 2855 (+)
Gene ID: Rep_3436_c_169_3
Type: STP
Location: 2868 - 4604 (+)
Type: STP
Location: 2868 - 4604 (+)
Gene ID: Rep_3436_c_169_4
Type: CAZyme
Location: 4723 - 6657 (-)
Type: CAZyme
Location: 4723 - 6657 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.