Cluster: Rep_3434_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3434
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3434_c_98 | Rep_3434_c_98_1 | 103 | 2190 | - | GH13_11 |
| pfam | Rep_3434_c_98 | Rep_3434_c_98_2 | 2358 | 2921 | - | Thia_YuaJ |
| pfam | Rep_3434_c_98 | Rep_3434_c_98_3 | 2978 | 3823 | - | QRPTase_C | QRPTase_N |
| TC | Rep_3434_c_98 | Rep_3434_c_98_4 | 3820 | 5289 | - | 3.D.10.1.4 |
Gene ID: Rep_3434_c_98_1
Type: CAZyme
Location: 103 - 2190 (-)
Type: CAZyme
Location: 103 - 2190 (-)
Gene ID: Rep_3434_c_98_2
Type: pfam
Location: 2358 - 2921 (-)
Type: pfam
Location: 2358 - 2921 (-)
Gene ID: Rep_3434_c_98_3
Type: pfam
Location: 2978 - 3823 (-)
Type: pfam
Location: 2978 - 3823 (-)
Gene ID: Rep_3434_c_98_4
Type: TC
Location: 3820 - 5289 (-)
Type: TC
Location: 3820 - 5289 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp946414115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.