Cluster: Rep_3434_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3434
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3434_c_97 | Rep_3434_c_97_9 | 7257 | 8651 | + | 2.A.50.2.1 |
| pfam | Rep_3434_c_97 | Rep_3434_c_97_10 | 8666 | 9823 | + | DHHW | ALGX |
| CAZyme | Rep_3434_c_97 | Rep_3434_c_97_11 | 9876 | 11408 | - | GH13_44 |
| NULL(UNKNOWN) | Rep_3434_c_97 | Rep_3434_c_97_12 | 11577 | 12134 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_3434_c_97 | Rep_3434_c_97_13 | 12143 | 12571 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3434_c_97 | Rep_3434_c_97_14 | 12668 | 13447 | + | CE1 |
Gene ID: Rep_3434_c_97_9
Type: TC
Location: 7257 - 8651 (+)
Type: TC
Location: 7257 - 8651 (+)
Gene ID: Rep_3434_c_97_10
Type: pfam
Location: 8666 - 9823 (+)
Type: pfam
Location: 8666 - 9823 (+)
Gene ID: Rep_3434_c_97_11
Type: CAZyme
Location: 9876 - 11408 (-)
Type: CAZyme
Location: 9876 - 11408 (-)
Gene ID: Rep_3434_c_97_12
Type:
Location: 11577 - 12134 (+)
Type:
Location: 11577 - 12134 (+)
Gene ID: Rep_3434_c_97_13
Type:
Location: 12143 - 12571 (-)
Type:
Location: 12143 - 12571 (-)
Gene ID: Rep_3434_c_97_14
Type: CAZyme
Location: 12668 - 13447 (+)
Type: CAZyme
Location: 12668 - 13447 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp946414115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.