Cluster: Rep_3434_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3434
- CGC Family ID: CGCFAM_10791
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3434_c_30 | Rep_3434_c_30_5 | 4142 | 7609 | + | GH13_19 |
| TC | Rep_3434_c_30 | Rep_3434_c_30_6 | 8415 | 9665 | + | 2.A.1.31.3 |
| pfam | Rep_3434_c_30 | Rep_3434_c_30_7 | 9682 | 12042 | + | FtsX |
| TC | Rep_3434_c_30 | Rep_3434_c_30_8 | 12055 | 12777 | + | 3.A.1.134.4 |
Gene ID: Rep_3434_c_30_5
Type: CAZyme
Location: 4142 - 7609 (+)
Type: CAZyme
Location: 4142 - 7609 (+)
Gene ID: Rep_3434_c_30_6
Type: TC
Location: 8415 - 9665 (+)
Type: TC
Location: 8415 - 9665 (+)
Gene ID: Rep_3434_c_30_7
Type: pfam
Location: 9682 - 12042 (+)
Type: pfam
Location: 9682 - 12042 (+)
Gene ID: Rep_3434_c_30_8
Type: TC
Location: 12055 - 12777 (+)
Type: TC
Location: 12055 - 12777 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp946414115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.